building a competitive 600 is NOT something you just do! Hell i have done over 100 R6's since 2006 alone and im STILL trying new things, changing small things, adjusting this or that. its constant. a honda is NOT the best platform imo they make the least power, especially top end/overrev of them all. the gear ratios are AWFUL for US tighter tracks, no slipper, etc. Still bulletproof engines. As for cylinder heads, i disagree with KC, some new bikes heads are garbage! the 09+R1 is one of the worst ever in recent years. The R6 is good maybe the best of the 600's but still you can get GOOD improvements with headwork BUT its not SS or DSB legal.
Keep it as simple and reliable as possible. power will not be the hardest thing racing ama. I know we are almost always in the top 5 for trap speeds but to get top 5 in the race takes the racer, suspension, brakes, etc...not just power. good luck